Create an html report of DMRs or blocks — DMReport • DMRichR

Create an html report of significant regions from dmrseq

Usage

DMReport(
  sigRegions = sigRegions,
  regions = regions,
  bs.filtered = bs.filtered,
  coverage = coverage,
  name = "DMReport"
)

Arguments

sigRegions: GRanges object of significant regions (DMRs or blocks) from dmrseq that were annotated by DMRichR::annotateRegions
regions: GRanges object of background regions from dmrseq
bs.filtered: Filtered bsseq object from processBismark()
coverage: Numeric of coverage samples were filtered for
name: Character for html report name

Value

Saves an html report of DMRs with genic annotations

Details

DMReport