Test DMRs for overlaps with CpG annotations (islands, shores, shelves, open sea)
Usage
DMRichCpG(sigRegions = sigRegions, regions = regions, genome = genome)
Arguments
- sigRegions
GRanges object of DMRs
- regions
GRanges object of background regions
- genome
A character vector specifying the genome of interest
c("hg38", "hg19", "mm10", "mm9", "rheMac10", "rheMac8", "rn6", "danRer11",
"galGal6", "bosTau9", "panTro6", "dm6", "susScr11", "canFam3")
Value
A tibble with the enrichment results
